Backup problems

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I've been using BackupMyPC (V6) for some time and it has worked well.
As a sideline I tried its replacement PCBackup, but it was really bad.
On top of that it has changed ownership several times now, and is no
longer supported. I can't seem to get the Windows Backup to run - the
screen never appears although is shows up in Task Manager and has to
be stopped.
Now the problem- I put in a second HD and set the backups to go there
instead of my USB drive. When the backup ends, there's a long list of
"not found" files in the log. I guess that maybe there's a timing
problem between the two drives and the retrieval expires. Does anyone
have a suggested fix?

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